DNA XML examples
The following is the latest definition of the DNA project XML. Whilst not a formal definition when viewed in conjunction with the DTD it is hoped this will make it easier to understand the structure of the project's XML.
<collect_start> <data-set id = "1"> <resolution="2.0"> <exposure_time="1.5"> <phi_start="0.0"> <phi_end="30.0"> <oscillation_range="1.0"> <no_passes="1"> [<slit>] <wavelength="0.978"> <directory="/data/dna"> <filename_template="steve_###.img"> <first_image_number="1"> </data_set> </collect_start> <collect_output> <status> <data_set_id> <error_message> </collect_output> <collect_end> </collect_end> <index_start> <project id1="ls1402" id2="run 4432" [id3,id4...]/> <fileinfo directory="/data/id14eh4/external/ls1402/se1/e1" filename_template="bfft_###.img" /> <image no="001" [phi_start="0.0"]/> [<image no="031" [phi_start="6.0"]/>] [<image no="061" [phi_start="12.0"]/>] [<detector type="adsc" gain="1.0" x_pixelsize="0.0816" y_pixelsize="0.0816"/>] [<beamline divergence="0.001" polarisation="0.98" /> ] [<data_collection wavelength="0.8374" distance="223.2" phi_range="0.2" x_beam="95.45" y_beam="93.43"/>] [<cell a="74.4 b="38.2" c="38.6" alpha="90.0" beta="90.0" gamma="90.0"/>] [<symmetry sym="p212121"/>] </index_start> <index_output program="mosflm" > <project id1="ls1402" id2="run 4432" [id3,id4...]/> <status flag = "ok" /> <solution no_reflections_used = "2342" no_reflections_rejected = "123" rms_spot_deviation = "0.234" x_beam_updated = "95.55" y_beam_updated = "93.23" laue_group = "P" [penalty = "10.0"]/> [<symmetry sym="p212121" />] <cell a="74.4 b="38.2" c="38.6" alpha="90.0" beta="90.0" gamma="90.0"/> <orientation_matrix type="amat" program="mosflm" e11="0.00328538" .../> /> </index_output>
<characterise_crystal> <id = "ls1402"> <symmetry sym="p212121" /> <resolution="2.0"> </characterise_crystal>
<expert_result> <status flag="ok|warning|error"> The indexing succeeded with results x, y, z. </status> </expert_result>
<beamline_params> <phi_now="0.0"> <wavelength="0.978"> <distance="250.0"> <beam_info> <slits> </beamline_params>
<dc_params> <exposure_time="1.5"> <oscillation_range="1.0"> <no_passes="1"> <project_id="1"> </dc_params>
<file_info> <directory="/data/dna"> <filename_template="steve_###.img"> </file_info>
<dp_result> <status flag="ok|warning|error"> Data processing failed : image not found. </status> </dp_result>
<abort/>
Last Updated: 7th-December-2001 by Steve Kinder