<!-- ******************************************************** * * dna_integrate.xsd * * Authors: The DNA team, http://www.dna.ac.uk * * Version: SId: dna_integrate.xsd,v 1.18 2005/11/22 13:38:15 svensson Exp S * ******************************************************** --> <xsd:schema xmlns:xsd="http://www.w3.org/2001/XMLSchema" xmlns:dna="http://www.dna.ac.uk/DNA_XMLSchema"> <xsd:include schemaLocation="dna_common.xsd"/> <xsd:complexType name="integrate_request"> <xsd:sequence> <xsd:element name="extra_commands" minOccurs="0" maxOccurs="1" type="extra_commands"/> <xsd:element name="start" minOccurs="1" maxOccurs="1" type="xsd:integer"/> <xsd:element name="end" minOccurs="1" maxOccurs="1" type="xsd:integer"/> <xsd:element name="number_of_batches" minOccurs="0" maxOccurs="1" type="xsd:integer"/> <xsd:element name="fileinfo" minOccurs="0" maxOccurs="1" type="fileinfo"/> </xsd:sequence> </xsd:complexType> <xsd:complexType name="single_integrate_request"> <xsd:sequence> <xsd:element name="extra_commands" minOccurs="0" maxOccurs="1" type="extra_commands"/> <xsd:element name="image" minOccurs="1" maxOccurs="unbounded" type="xsd:integer"/> <xsd:element name="fileinfo" minOccurs="0" maxOccurs="1" type="fileinfo"/> </xsd:sequence> </xsd:complexType> <xsd:complexType name="integrate_response"> <xsd:sequence> <xsd:element name="status" minOccurs="1" maxOccurs="1" type="status"/> <!-- need to define the type "integrated_image" somewhere --> <xsd:element name="integrated_image" minOccurs="0" maxOccurs="unbounded" type="integrated_image"/> <xsd:element name="calculated_resolution" minOccurs="0" maxOccurs="1" type="resolution"/> </xsd:sequence> </xsd:complexType> <xsd:complexType name="spot_information"> <xsd:sequence> <xsd:element name="full_spots" minOccurs="1" maxOccurs="1" type="xsd:integer"/> <xsd:element name="partial_spots" minOccurs="1" maxOccurs="1" type="xsd:integer"/> <xsd:element name="overlap_spots" minOccurs="1" maxOccurs="1" type="xsd:integer"/> <xsd:element name="negative_spots" minOccurs="1" maxOccurs="1" type="xsd:integer"/> <xsd:element name="bad_spots" minOccurs="1" maxOccurs="1" type="xsd:integer"/> </xsd:sequence> </xsd:complexType> <xsd:complexType name="integration_summary"> <xsd:sequence> <xsd:element name="distance" minOccurs="1" maxOccurs="1" type="xsd:double"/> <xsd:element name="yscale" minOccurs="1" maxOccurs="1" type="xsd:double"/> <xsd:element name="overall_signal" minOccurs="1" maxOccurs="1" type="xsd:double"/> <xsd:element name="outer_signal" minOccurs="1" maxOccurs="1" type="xsd:double"/> <xsd:element name="spot_information" minOccurs="1" maxOccurs="1" type="spot_information"/> </xsd:sequence> </xsd:complexType> <xsd:complexType name="integrated_image"> <xsd:sequence> <xsd:element name="image" minOccurs="1" maxOccurs="1" type="xsd:integer"/> <xsd:element name="integration_bin" minOccurs="1" maxOccurs="unbounded" type="integration_bin"/> <xsd:element name="integration_summary" minOccurs="1" maxOccurs="1" type="integration_summary"/> <xsd:element name="refined_mosaic_spread" type="xsd:double" minOccurs="0" maxOccurs="1"/> <xsd:element name="resolution" minOccurs="0" maxOccurs="1" type="resolution"/> </xsd:sequence> </xsd:complexType> <!-- next to define a few of the types here described --> <xsd:complexType name="spot_profile"> <xsd:sequence> <xsd:element name="width" minOccurs="1" maxOccurs="1" type="xsd:integer"/> <xsd:element name="height" minOccurs="1" maxOccurs="1" type="xsd:integer"/> <!-- the profile is really a sequence of integers, but how can we express this in an XML Schema? --> <xsd:element name="profile" minOccurs="1" maxOccurs="1" type="xsd:string"/> <xsd:element name="mask" minOccurs="1" maxOccurs="1" type="xsd:string"/> </xsd:sequence> </xsd:complexType> <xsd:complexType name="integration_bin"> <xsd:sequence> <xsd:element name="number" minOccurs="1" maxOccurs="1" type="xsd:integer"/> <!-- also need to define the resolution type --> <xsd:element name="resolution" minOccurs="1" maxOccurs="1" type="resolution"/> <xsd:element name="measured_spots_profile" minOccurs="1" maxOccurs="1" type="measured_spot_summary"/> <xsd:element name="measured_spots_summation" minOccurs="1" maxOccurs="1" type="measured_spot_summary"/> </xsd:sequence> </xsd:complexType> <xsd:complexType name="measured_spot_summary"> <xsd:sequence> <xsd:element name="full" minOccurs="1" maxOccurs="1" type="spot_summary_element"/> <xsd:element name="partial" minOccurs="1" maxOccurs="1" type="spot_summary_element"/> </xsd:sequence> </xsd:complexType> <xsd:complexType name="spot_summary_element"> <xsd:sequence> <xsd:element name="spot_count" minOccurs="1" maxOccurs="1" type="xsd:integer"/> <xsd:element name="signal" minOccurs="1" maxOccurs="1" type="xsd:integer"/> <xsd:element name="noise" minOccurs="1" maxOccurs="1" type="xsd:integer"/> <xsd:element name="signal_to_noise" minOccurs="1" maxOccurs="1" type="xsd:double"/> </xsd:sequence> </xsd:complexType> <xsd:complexType name="start_images"> <xsd:sequence> <xsd:element name="image" minOccurs="1" maxOccurs="unbounded" type="xsd:integer"/> </xsd:sequence> </xsd:complexType> <xsd:complexType name="end_images"> <xsd:sequence> <xsd:element name="image" minOccurs="1" maxOccurs="unbounded" type="xsd:integer"/> </xsd:sequence> </xsd:complexType> <xsd:complexType name="cell_refinement_request"> <xsd:sequence> <xsd:element name="extra_commands" minOccurs="0" maxOccurs="1" type="extra_commands"/> <xsd:element name="start_images" minOccurs="1" maxOccurs="1" type="start_images"/> <xsd:element name="end_images" minOccurs="1" maxOccurs="1" type="end_images"/> <xsd:element name="symmetry" minOccurs="0" maxOccurs="1" type="spacegroup"/> <xsd:element name="fileinfo" minOccurs="0" maxOccurs="1" type="fileinfo"/> </xsd:sequence> </xsd:complexType> <xsd:complexType name="cell_refinement_response"> <xsd:sequence> <xsd:element name="status" minOccurs="1" maxOccurs="1" type="status"/> <xsd:element name="refined_cell" minOccurs="0" maxOccurs="1" type="cell"/> <xsd:element name="refined_mosaic_spread" type="xsd:double" minOccurs="0" maxOccurs="1"/> </xsd:sequence> </xsd:complexType> </xsd:schema>